Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00245 | Not Available | Positive | 298715 - 298876 | 6122.36 |
| mannose-6-phosphate isomerase | LV84_00246 | Not Available | Negative | 298909 - 299430 | 20072.8 |
| putative nbd/hsp70 family sugar kinase | LV84_00247 | Not Available | Positive | 299650 - 300897 | 45011.9 |
| vcbs repeat protein | LV84_00248 | Not Available | Positive | 300912 - 304196 | 121371.0 |
| pap2 superfamily protein | LV84_00249 | Not Available | Positive | 304244 - 305521 | 48025.3 |
| arylsulfatase a-like enzyme | LV84_00250 | Not Available | Positive | 305536 - 306969 | 53224.3 |
| glucokinase | LV84_00251 | Not Available | Negative | 307170 - 308027 | 30888.9 |
| chitinase | LV84_00252 | Not Available | Negative | 308063 - 308389 | 12329.3 |
| susd-like starch-binding protein associating with outer membrane | LV84_00253 | Not Available | Negative | 308546 - 310129 | 59738.3 |
| tonb-linked susc/raga family outer membrane protein | LV84_00254 | Not Available | Negative | 310158 - 313502 | 122245.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
