Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator gbsr (marr family) | LV84_02575 | Not Available | Negative | 2973039 - 2973500 | 17895.7 |
| arac family transcriptional regulator | LV84_02576 | Not Available | Positive | 2973729 - 2974268 | 20643.9 |
| rna polymerase sigma factor (sigma-70 family) | LV84_02577 | Not Available | Positive | 2974433 - 2975026 | 22806.5 |
| fecr family protein | LV84_02578 | Not Available | Positive | 2975178 - 2976260 | 41509.5 |
| tonb-linked susc/raga family outer membrane protein | LV84_02579 | Not Available | Positive | 2976414 - 2979698 | 121183.0 |
| putative outer membrane starch-binding protein | LV84_02580 | Not Available | Positive | 2979712 - 2981331 | 60661.1 |
| uncharacterized protein duf1080 | LV84_02581 | Not Available | Positive | 2981453 - 2983240 | 64057.6 |
| hypothetical protein | LV84_02582 | Not Available | Positive | 2983259 - 2985184 | 70334.3 |
| peptidase m28-like protein | LV84_02583 | Not Available | Positive | 2985447 - 2986745 | 47179.9 |
| crp-like camp-binding protein | LV84_02584 | Not Available | Positive | 2986956 - 2987537 | 22567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
