Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyadenosine/deoxycytidine kinase | LV84_02565 | Not Available | Positive | 2961014 - 2961631 | 23933.4 |
| hypothetical protein | LV84_02566 | Not Available | Negative | 2961766 - 2962401 | 24889.8 |
| hypothetical protein | LV84_02567 | Not Available | Negative | 2962485 - 2962625 | 5259.59 |
| hypothetical protein | LV84_02568 | Not Available | Positive | 2962823 - 2963158 | 13247.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | LV84_02569 | Not Available | Positive | 2963186 - 2965555 | 90144.8 |
| hypothetical protein | LV84_02570 | Not Available | Positive | 2965675 - 2965867 | 7360.12 |
| acyl carrier protein | LV84_02571 | Not Available | Negative | 2966867 - 2967160 | 11269.0 |
| hae1 family hydrophobic/amphiphilic exporter-1 | LV84_02572 | Not Available | Negative | 2967276 - 2970434 | 114860.0 |
| rnd family efflux transporter mfp subunit | LV84_02573 | Not Available | Negative | 2970438 - 2971490 | 38936.0 |
| outer membrane protein tolc | LV84_02574 | Not Available | Negative | 2971599 - 2972966 | 51542.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
