Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit a | LV84_02555 | Not Available | Negative | 2950322 - 2952946 | 98828.5 |
| topoisomerase-4 subunit b | LV84_02556 | Not Available | Negative | 2953041 - 2954942 | 72000.7 |
| hypothetical protein | LV84_02557 | Not Available | Negative | 2954965 - 2955459 | 19052.7 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | LV84_02558 | Not Available | Positive | 2955575 - 2956765 | 46647.0 |
| hypothetical protein | LV84_02559 | Not Available | Positive | 2956810 - 2957196 | 14633.5 |
| glucokinase | LV84_02560 | Not Available | Negative | 2957177 - 2958109 | 33199.4 |
| hypothetical protein | LV84_02561 | Not Available | Negative | 2958156 - 2958650 | 19178.0 |
| arsenate reductase | LV84_02562 | Not Available | Positive | 2958755 - 2959129 | 14388.5 |
| hypothetical protein | LV84_02563 | Not Available | Negative | 2959107 - 2959943 | 31616.3 |
| 3-hydroxybutyryl-coa dehydrogenase | LV84_02564 | Not Available | Positive | 2960119 - 2961009 | 32337.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
