Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing protease ctpa/prc | LV84_02545 | Not Available | Negative | 2935929 - 2939162 | 121502.0 |
| tyrosyl-trna synthetase | LV84_02546 | Not Available | Positive | 2939320 - 2940612 | 48104.5 |
| tetr family transcriptional regulator | LV84_02547 | Not Available | Positive | 2940761 - 2941456 | 26544.5 |
| imidazolonepropionase-like amidohydrolase | LV84_02548 | Not Available | Positive | 2941495 - 2942883 | 50475.9 |
| pot family proton-dependent oligopeptide transporter | LV84_02549 | Not Available | Negative | 2942963 - 2944525 | 56058.0 |
| phosphoenolpyruvate carboxykinase (atp) | LV84_02550 | Not Available | Positive | 2944809 - 2946407 | 59185.5 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | LV84_02551 | Not Available | Positive | 2946652 - 2947089 | 15930.9 |
| hypothetical protein | LV84_02552 | Not Available | Negative | 2947287 - 2948861 | 58670.2 |
| hypothetical protein | LV84_02553 | Not Available | Positive | 2949004 - 2949609 | 22776.6 |
| trna (guanosine-2'-o-)-methyltransferase | LV84_02554 | Not Available | Negative | 2949606 - 2950307 | 26786.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
