Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase family protein | LV84_02535 | Not Available | Positive | 2927248 - 2928705 | 53518.3 |
| ompa family protein | LV84_02536 | Not Available | Negative | 2928826 - 2930451 | 59564.2 |
| homospermidine synthase (spermidine-specific) | LV84_02537 | Not Available | Negative | 2930455 - 2931426 | 36472.5 |
| periplasmic chaperone for outer membrane proteins skp | LV84_02538 | Not Available | Negative | 2931524 - 2932123 | 21888.7 |
| acetoin utilization deacetylase acuc-like enzyme | LV84_02539 | Not Available | Negative | 2932222 - 2933061 | 31144.9 |
| hypothetical protein | LV84_02540 | Not Available | Negative | 2933180 - 2933743 | 21756.0 |
| putative membrane protein | LV84_02541 | Not Available | Negative | 2934105 - 2934449 | 12563.2 |
| hypothetical protein | LV84_02542 | Not Available | Positive | 2934549 - 2934686 | 5055.38 |
| stearoyl-coa desaturase (delta-9 desaturase) | LV84_02543 | Not Available | Positive | 2934712 - 2935365 | 26206.6 |
| putative transcriptional regulator | LV84_02544 | Not Available | Positive | 2935529 - 2935858 | 12796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
