Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-1 | LV84_02515 | Not Available | Positive | 2909258 - 2910295 | 39937.9 |
| small-conductance mechanosensitive channel | LV84_02516 | Not Available | Positive | 2910346 - 2911302 | 35382.0 |
| membrane protein | LV84_02517 | Not Available | Positive | 2911302 - 2912324 | 37708.4 |
| phosphoglucomutase | LV84_02518 | Not Available | Positive | 2912523 - 2914253 | 63738.2 |
| 6-bladed beta-propeller protein | LV84_02519 | Not Available | Positive | 2914426 - 2915184 | 28917.3 |
| hypothetical protein | LV84_02520 | Not Available | Positive | 2915311 - 2915487 | 6841.2 |
| dimethylhistidine n-methyltransferase | LV84_02521 | Not Available | Negative | 2915540 - 2916505 | 36813.9 |
| ergothioneine biosynthesis protein egtb | LV84_02522 | Not Available | Negative | 2916509 - 2917654 | 44487.2 |
| hypothetical protein | LV84_02523 | Not Available | Negative | 2917699 - 2918643 | 34371.0 |
| udp-n-acetylmuramate dehydrogenase | LV84_02524 | Not Available | Positive | 2918833 - 2919846 | 37421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
