Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase | LV84_00235 | Not Available | Positive | 287176 - 288375 | 43687.1 |
| putative unusual protein kinase regulating ubiquinone biosynthesis (aarf/abc1/ubib family) | LV84_00236 | Not Available | Negative | 288590 - 289909 | 50629.2 |
| acrr family transcriptional regulator | LV84_00237 | Not Available | Negative | 289913 - 290578 | 25879.9 |
| atp-dependent hsluv protease subunit hslv | LV84_00238 | Not Available | Negative | 291000 - 291542 | 19429.6 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | LV84_00239 | Not Available | Negative | 291683 - 293305 | 57559.9 |
| hypothetical protein | LV84_00240 | Not Available | Positive | 293466 - 294425 | 36372.5 |
| putative sos response-associated peptidase yedk | LV84_00241 | Not Available | Positive | 294455 - 295153 | 26657.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | LV84_00242 | Not Available | Positive | 295328 - 296326 | 36224.4 |
| hypothetical protein | LV84_00243 | Not Available | Positive | 296327 - 296881 | 21162.4 |
| antitoxin component ywqk of ywqjk toxin-antitoxin module | LV84_00244 | Not Available | Positive | 297098 - 298675 | 60121.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
