Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein with beta-barrel domain | LV84_02455 | Not Available | Negative | 2831164 - 2831760 | 21596.5 |
| putative amino acid racemase | LV84_02456 | Not Available | Negative | 2831834 - 2832907 | 40022.8 |
| acetyltransferase (gnat) family protein | LV84_02457 | Not Available | Negative | 2832909 - 2833349 | 16211.0 |
| sss family solute:na+ symporter | LV84_02458 | Not Available | Negative | 2833346 - 2834782 | 51522.1 |
| hypothetical protein | LV84_02459 | Not Available | Negative | 2835249 - 2835566 | 11682.1 |
| sigma-b regulation protein rsbq | LV84_02460 | Not Available | Negative | 2835627 - 2836421 | 29058.5 |
| hypothetical protein | LV84_02461 | Not Available | Negative | 2836656 - 2837639 | 37467.3 |
| putative hydrolase of hd superfamily | LV84_02462 | Not Available | Negative | 2838053 - 2838334 | 10636.7 |
| wg repeat protein | LV84_02463 | Not Available | Negative | 2838925 - 2840676 | 67208.5 |
| hypothetical protein | LV84_02464 | Not Available | Negative | 2840921 - 2841367 | 16677.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
