Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | LV84_02445 | Not Available | Positive | 2819044 - 2820150 | 41465.7 |
| general stress protein 26 | LV84_02446 | Not Available | Negative | 2820384 - 2820920 | 19927.2 |
| sgnh-like hydrolase/esterase family protein | LV84_02447 | Not Available | Negative | 2821139 - 2822233 | 40958.9 |
| putative membrane-bound dehydrogenase-like protein | LV84_02448 | Not Available | Positive | 2822441 - 2825449 | 112112.0 |
| metallo-beta-lactamase class b | LV84_02449 | Not Available | Positive | 2825642 - 2826382 | 27001.3 |
| 3-oxoacyl-[acyl-carrier protein] reductase | LV84_02450 | Not Available | Positive | 2826529 - 2827251 | 25513.8 |
| endo-1,4-beta-xylanase | LV84_02451 | Not Available | Negative | 2827288 - 2828172 | 33585.7 |
| endo-1,4-beta-xylanase | LV84_02452 | Not Available | Negative | 2828115 - 2828399 | 10682.2 |
| parallel beta-helix repeat protein | LV84_02453 | Not Available | Positive | 2828546 - 2829886 | 48856.6 |
| putative repeat protein (tigr03806 family) | LV84_02454 | Not Available | Positive | 2829886 - 2830977 | 40799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
