Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LV84_02425 | Not Available | Negative | 2795751 - 2796377 | 23870.0 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | LV84_02426 | Not Available | Negative | 2796379 - 2797581 | 45934.6 |
| hypothetical protein | LV84_02427 | Not Available | Negative | 2797584 - 2797922 | 13037.3 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | LV84_02428 | Not Available | Negative | 2797870 - 2798970 | 41813.6 |
| holliday junction endonuclease ruvc | LV84_02429 | Not Available | Positive | 2798992 - 2799567 | 21228.0 |
| outer membrane protein with beta-barrel domain | LV84_02430 | Not Available | Negative | 2799823 - 2800377 | 19970.8 |
| crp-like camp-binding protein | LV84_02431 | Not Available | Positive | 2800557 - 2801120 | 22220.8 |
| hypothetical protein | LV84_02432 | Not Available | Negative | 2801265 - 2801651 | 14874.1 |
| hypothetical protein | LV84_02433 | Not Available | Negative | 2801822 - 2802310 | 19183.3 |
| hypothetical protein | LV84_02434 | Not Available | Negative | 2802402 - 2802776 | 14366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
