Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbb | LV84_02415 | Not Available | Negative | 2786374 - 2787171 | 28430.3 |
| o-glycosyl hydrolase | LV84_02416 | Not Available | Negative | 2787691 - 2789262 | 58237.5 |
| hemolysin iii | LV84_02417 | Not Available | Negative | 2789464 - 2790234 | 28541.8 |
| hypothetical protein | LV84_02418 | Not Available | Negative | 2790745 - 2791389 | 25028.1 |
| hypothetical protein | LV84_02419 | Not Available | Negative | 2791382 - 2791774 | 15442.3 |
| hypothetical protein | LV84_02420 | Not Available | Negative | 2792299 - 2792436 | 5198.28 |
| Trna-ser | Not Available | Not Available | Positive | 2792492 - 2792576 | Not Available |
| l-asparaginase | LV84_02422 | Not Available | Negative | 2792676 - 2793743 | 39126.6 |
| tatd dnase family protein | LV84_02423 | Not Available | Negative | 2793740 - 2794516 | 29427.5 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | LV84_02424 | Not Available | Negative | 2794645 - 2795754 | 41982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
