Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2777112 - 2777188 | Not Available |
| outer membrane protein with beta-barrel domain | LV84_02406 | Not Available | Positive | 2777370 - 2778125 | 28061.2 |
| hypothetical protein | LV84_02407 | Not Available | Negative | 2778175 - 2778795 | 23044.4 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | LV84_02408 | Not Available | Negative | 2778795 - 2780249 | 55828.8 |
| asparaginyl-trna synthetase | LV84_02409 | Not Available | Positive | 2780430 - 2781881 | 54794.3 |
| nad(p)h-hydrate epimerase | LV84_02410 | Not Available | Negative | 2782044 - 2783513 | 53295.7 |
| umf1 family mfs transporter | LV84_02411 | Not Available | Negative | 2783516 - 2784829 | 48918.3 |
| biopolymer transport protein exbd | LV84_02412 | Not Available | Negative | 2784891 - 2785349 | 17173.2 |
| biopolymer transport protein exbd | LV84_02413 | Not Available | Negative | 2785351 - 2785986 | 23201.4 |
| hypothetical protein | LV84_02414 | Not Available | Negative | 2785988 - 2786317 | 11445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
