Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | LV84_00226 | Not Available | Positive | 276581 - 278341 | 66346.3 |
| acyl-coa reductase luxc | LV84_00227 | Not Available | Negative | 278348 - 279361 | 38054.4 |
| 4fe-4s dicluster protein | LV84_00228 | Not Available | Positive | 279435 - 279848 | 15176.9 |
| uncharacterized protein duf3276 | LV84_00229 | Not Available | Positive | 280015 - 280344 | 13326.2 |
| putative purr-regulated permease perm | LV84_00230 | Not Available | Positive | 280434 - 281519 | 40730.2 |
| hypothetical protein | LV84_00231 | Not Available | Positive | 281527 - 282624 | 40439.8 |
| crispr-associated endoribonuclease cas6 | LV84_00232 | Not Available | Positive | 282722 - 283633 | 34829.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 283513 - 283595 | Not Available |
| uncharacterized protein duf5103 | LV84_00233 | Not Available | Negative | 283836 - 285113 | 49744.8 |
| atp-binding cassette subfamily f protein 3 | LV84_00234 | Not Available | Negative | 285154 - 287082 | 72992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
