Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | LV84_02373 | Not Available | Positive | 2734112 - 2734900 | 30639.4 |
| tricorn protease | LV84_02374 | Not Available | Negative | 2735471 - 2738767 | 123120.0 |
| putative secreted protein (por secretion system target) | LV84_02375 | Not Available | Positive | 2739651 - 2745842 | 223404.0 |
| tetratricopeptide repeat protein | LV84_02376 | Not Available | Positive | 2746344 - 2748503 | 80849.6 |
| hypothetical protein | LV84_02377 | Not Available | Negative | 2748886 - 2749095 | 7835.59 |
| lyttr family two component transcriptional regulator | LV84_02378 | Not Available | Negative | 2749146 - 2749877 | 27889.0 |
| two-component sensor histidine kinase | LV84_02379 | Not Available | Negative | 2749874 - 2751835 | 75185.8 |
| hypothetical protein | LV84_02380 | Not Available | Positive | 2752014 - 2752532 | 19605.1 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | LV84_02381 | Not Available | Negative | 2752816 - 2753835 | 37545.6 |
| tryptophan synthase alpha chain | LV84_02382 | Not Available | Negative | 2753940 - 2754722 | 28799.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
