Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02363 | Not Available | Negative | 2719571 - 2720863 | 48945.9 |
| cbb3-type cytochrome c oxidase subunit iii | LV84_02364 | Not Available | Negative | 2720866 - 2721564 | 24893.3 |
| uncharacterized protein duf3341 | LV84_02365 | Not Available | Negative | 2721578 - 2722108 | 19786.1 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | LV84_02366 | Not Available | Negative | 2722111 - 2723475 | 51329.1 |
| molybdopterin-containing oxidoreductase family iron-sulfur binding subunit | LV84_02367 | Not Available | Negative | 2723493 - 2726576 | 112129.0 |
| mono/diheme cytochrome c family protein | LV84_02368 | Not Available | Negative | 2726616 - 2728010 | 50604.7 |
| Trna-cys | Not Available | Not Available | Positive | 2728244 - 2728317 | Not Available |
| outer membrane protein with beta-barrel domain | LV84_02370 | Not Available | Negative | 2728431 - 2728976 | 19827.7 |
| small subunit ribosomal protein s1 | LV84_02371 | Not Available | Negative | 2729292 - 2731106 | 67131.3 |
| hypothetical protein | LV84_02372 | Not Available | Negative | 2731811 - 2733466 | 58926.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
