Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02353 | Not Available | Negative | 2711253 - 2711504 | 9200.58 |
| putative membrane protein | LV84_02354 | Not Available | Negative | 2711625 - 2712179 | 20637.7 |
| protein sco1/2 | LV84_02355 | Not Available | Negative | 2712160 - 2712834 | 25417.5 |
| cytochrome c oxidase subunit iv | LV84_02356 | Not Available | Negative | 2712911 - 2713243 | 12913.6 |
| cytochrome c oxidase subunit 3 | LV84_02357 | Not Available | Negative | 2713262 - 2714038 | 29039.3 |
| cytochrome c oxidase subunit 3 | LV84_02358 | Not Available | Negative | 2714066 - 2714647 | 22189.5 |
| protoheme ix farnesyltransferase | LV84_02359 | Not Available | Negative | 2714650 - 2715552 | 32816.1 |
| cytochrome c oxidase assembly protein subunit 15 | LV84_02360 | Not Available | Negative | 2715555 - 2716631 | 40899.4 |
| cytochrome c oxidase subunit 1 | LV84_02361 | Not Available | Negative | 2716615 - 2718498 | 70303.4 |
| cytochrome c oxidase subunit 2 | LV84_02362 | Not Available | Negative | 2718517 - 2719548 | 38808.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
