Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | LV84_02303 | Not Available | Positive | 2646357 - 2647553 | 45922.1 |
| response regulator receiver domain-containing protein | LV84_02304 | Not Available | Positive | 2647571 - 2647972 | 14666.8 |
| hypothetical protein | LV84_02305 | Not Available | Negative | 2648164 - 2649183 | 37638.6 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | LV84_02306 | Not Available | Negative | 2649230 - 2649967 | 27801.9 |
| sugar phosphate isomerase/epimerase | LV84_02307 | Not Available | Positive | 2650281 - 2651183 | 33933.5 |
| atp-dependent helicase hepa | LV84_02308 | Not Available | Negative | 2651361 - 2654189 | 106957.0 |
| anti-sigma b factor antagonist | LV84_02309 | Not Available | Negative | 2654667 - 2655008 | 12668.4 |
| fur family ferric uptake transcriptional regulator | LV84_02310 | Not Available | Negative | 2655116 - 2655589 | 18432.2 |
| gtp pyrophosphokinase | LV84_02311 | Not Available | Negative | 2655644 - 2657860 | 84570.6 |
| Trna-leu | Not Available | Not Available | Positive | 2658017 - 2658101 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
