Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | LV84_02273 | Not Available | Negative | 2617563 - 2618189 | 24032.4 |
| transposase is200 family protein | LV84_02274 | Not Available | Negative | 2618697 - 2619251 | 21660.9 |
| phosphoribosylformylglycinamidine synthase | LV84_02275 | Not Available | Positive | 2620135 - 2623815 | 134580.0 |
| hypothetical protein | LV84_02276 | Not Available | Negative | 2623994 - 2624368 | 14618.2 |
| tetratricopeptide repeat protein | LV84_02277 | Not Available | Negative | 2624375 - 2624866 | 18432.0 |
| hypothetical protein | LV84_02278 | Not Available | Negative | 2625194 - 2625475 | 10800.0 |
| hypothetical protein | LV84_02279 | Not Available | Negative | 2625479 - 2625757 | 10713.0 |
| hypothetical protein | LV84_02280 | Not Available | Negative | 2626227 - 2626409 | 7020.35 |
| putative nucleic acid-binding protein | LV84_02281 | Not Available | Positive | 2626875 - 2627339 | 17776.2 |
| hypothetical protein | LV84_02282 | Not Available | Positive | 2627329 - 2627484 | 6148.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
