Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02263 | Not Available | Positive | 2603629 - 2604648 | 38838.8 |
| dna ligase (nad+) | LV84_02264 | Not Available | Positive | 2604794 - 2607247 | 91922.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LV84_02265 | Not Available | Positive | 2607396 - 2608259 | 30660.4 |
| exodeoxyribonuclease vii large subunit | LV84_02266 | Not Available | Positive | 2608261 - 2609571 | 48816.9 |
| exodeoxyribonuclease vii small subunit | LV84_02267 | Not Available | Positive | 2609568 - 2609756 | 6990.27 |
| hypothetical protein | LV84_02268 | Not Available | Positive | 2609893 - 2610597 | 26047.0 |
| transcription antitermination factor nusg | LV84_02269 | Not Available | Negative | 2610696 - 2611196 | 19145.3 |
| multidrug efflux pump subunit acrb | LV84_02270 | Not Available | Negative | 2611344 - 2614748 | 125403.0 |
| rnd family efflux transporter mfp subunit | LV84_02271 | Not Available | Negative | 2614753 - 2615886 | 41820.1 |
| outer membrane protein tolc | LV84_02272 | Not Available | Negative | 2616141 - 2617520 | 51672.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
