Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response ompr family regulator | LV84_02253 | Not Available | Negative | 2592161 - 2592934 | 29569.8 |
| putative iron-regulated membrane protein | LV84_02254 | Not Available | Negative | 2593403 - 2594656 | 47373.1 |
| hypothetical protein | LV84_02255 | Not Available | Positive | 2594922 - 2595692 | 29506.6 |
| putative alpha-e superfamily protein | LV84_02256 | Not Available | Negative | 2595714 - 2596700 | 38082.4 |
| putative circularly permuted atp-grasp superfamily protein | LV84_02257 | Not Available | Negative | 2596889 - 2598313 | 53504.2 |
| uncharacterized membrane-anchored protein yitt (duf2179 family) | LV84_02258 | Not Available | Positive | 2598570 - 2599475 | 32555.1 |
| methionyl-trna synthetase | LV84_02259 | Not Available | Negative | 2599611 - 2601707 | 79041.7 |
| tetr family transcriptional regulator | LV84_02260 | Not Available | Negative | 2601765 - 2602397 | 23790.2 |
| phage derived gp49-like protein duf891 | LV84_02261 | Not Available | Positive | 2602666 - 2603001 | 13652.5 |
| helix-turn-helix protein | LV84_02262 | Not Available | Positive | 2603006 - 2603305 | 11326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
