Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein b | LV84_02243 | Not Available | Negative | 2579270 - 2580244 | 36255.6 |
| acetyltransferase (gnat) family protein | LV84_02244 | Not Available | Negative | 2580299 - 2580871 | 21480.7 |
| hypothetical protein | LV84_02245 | Not Available | Negative | 2580876 - 2581223 | 12965.1 |
| putative membrane protein | LV84_02246 | Not Available | Negative | 2581377 - 2581853 | 18390.2 |
| hypothetical protein | LV84_02247 | Not Available | Negative | 2581984 - 2582247 | 9747.65 |
| arylsulfatase a-like enzyme | LV84_02248 | Not Available | Positive | 2582258 - 2583679 | 52784.9 |
| gaf domain-containing protein | LV84_02249 | Not Available | Positive | 2583878 - 2584348 | 16819.3 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | LV84_02250 | Not Available | Negative | 2584957 - 2586117 | 42924.8 |
| cobalt-zinc-cadmium resistance protein czca | LV84_02251 | Not Available | Negative | 2586223 - 2590548 | 159443.0 |
| signal transduction histidine kinase | LV84_02252 | Not Available | Negative | 2590785 - 2592164 | 52162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
