Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose utilization protein | LV84_02233 | Not Available | Positive | 2566304 - 2567314 | 37826.3 |
| d-psicose/d-tagatose/l-ribulose 3-epimerase | LV84_02234 | Not Available | Positive | 2567443 - 2568294 | 31814.5 |
| putative membrane-bound dehydrogenase-like protein | LV84_02235 | Not Available | Positive | 2568425 - 2571574 | 118506.0 |
| atp-dependent rna helicase rhle | LV84_02236 | Not Available | Negative | 2572011 - 2573264 | 45828.8 |
| hopj type iii effector protein | LV84_02237 | Not Available | Positive | 2573920 - 2574258 | 12673.7 |
| arylsulfatase a-like enzyme | LV84_02238 | Not Available | Negative | 2574416 - 2575810 | 53389.2 |
| protein of unknown function (duf303) | LV84_02239 | Not Available | Positive | 2576294 - 2577112 | 30158.4 |
| uncharacterized protein ydei (yjbr/cyay-like superfamily) | LV84_02240 | Not Available | Negative | 2577115 - 2577693 | 21920.4 |
| uncharacterized protein duf1801 | LV84_02241 | Not Available | Negative | 2577810 - 2578226 | 16206.7 |
| uncharacterized protein glcg (duf336 family) | LV84_02242 | Not Available | Negative | 2578392 - 2578790 | 13598.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
