Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02213 | Not Available | Negative | 2534764 - 2535276 | 18714.4 |
| trk system potassium uptake protein trkh | LV84_02214 | Not Available | Negative | 2535387 - 2536835 | 53281.3 |
| trk system potassium uptake protein trka | LV84_02215 | Not Available | Negative | 2536839 - 2538185 | 50084.6 |
| dna recombination protein rmuc | LV84_02216 | Not Available | Negative | 2538753 - 2539997 | 47294.0 |
| pimeloyl-acp methyl ester carboxylesterase | LV84_02217 | Not Available | Negative | 2539987 - 2540994 | 37759.6 |
| nramp (natural resistance-associated macrophage protein)-like metal ion transporter | LV84_02218 | Not Available | Positive | 2541090 - 2542319 | 43356.3 |
| hypothetical protein | LV84_02219 | Not Available | Positive | 2542555 - 2543052 | 16806.3 |
| subtilase family protein | LV84_02220 | Not Available | Positive | 2543416 - 2544990 | 55837.1 |
| putative dehydrogenase | LV84_02221 | Not Available | Negative | 2545176 - 2546516 | 49621.6 |
| uncharacterized protein duf1080 | LV84_02222 | Not Available | Negative | 2546592 - 2547359 | 27794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
