Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | LV84_02203 | Not Available | Negative | 2522803 - 2523627 | 31371.5 |
| l-serine dehydratase | LV84_02204 | Not Available | Positive | 2523782 - 2524459 | 24216.0 |
| outer membrane protein | LV84_02205 | Not Available | Positive | 2524479 - 2525816 | 49548.2 |
| hlyd family secretion protein | LV84_02206 | Not Available | Positive | 2525820 - 2527130 | 47234.2 |
| septum formation protein | LV84_02207 | Not Available | Negative | 2527302 - 2527907 | 23015.7 |
| uncharacterized protein (duf1015 family) | LV84_02208 | Not Available | Negative | 2527870 - 2529168 | 50088.9 |
| propionyl-coa carboxylase alpha chain | LV84_02209 | Not Available | Negative | 2529171 - 2530667 | 55132.1 |
| glycine c-acetyltransferase | LV84_02210 | Not Available | Positive | 2530847 - 2532097 | 45853.5 |
| histone h1-like protein hc1 | LV84_02211 | Not Available | Positive | 2532200 - 2532376 | 6662.86 |
| peptidase m1-like protein | LV84_02212 | Not Available | Negative | 2532445 - 2534286 | 69850.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
