Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-cytosine permease-like protein | LV84_02193 | Not Available | Positive | 2509678 - 2511102 | 51595.1 |
| hypothetical protein | LV84_02194 | Not Available | Positive | 2511105 - 2511296 | 7184.95 |
| l-rhamnose isomerase/sugar isomerase | LV84_02195 | Not Available | Positive | 2511506 - 2512783 | 46948.4 |
| heme-degrading monooxygenase hmoa | LV84_02196 | Not Available | Positive | 2513661 - 2513987 | 12563.6 |
| hypothetical protein | LV84_02197 | Not Available | Negative | 2514123 - 2514695 | 21401.5 |
| esterase/lipase | LV84_02198 | Not Available | Positive | 2514826 - 2515884 | 39843.4 |
| sialate o-acetylesterase | LV84_02199 | Not Available | Negative | 2515929 - 2517830 | 71421.4 |
| xylose isomerase | LV84_02200 | Not Available | Negative | 2518169 - 2519482 | 49197.0 |
| xylulokinase | LV84_02201 | Not Available | Negative | 2519526 - 2521028 | 55097.1 |
| sss family solute:na+ symporter | LV84_02202 | Not Available | Negative | 2521041 - 2522684 | 59030.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
