Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ribosome quality control (rqc) complex yloa/tae2 family protein | LV84_00206 | Not Available | Positive | 248111 - 249691 | 60193.5 |
| pyruvate kinase | LV84_00207 | Not Available | Negative | 249859 - 251283 | 51799.2 |
| hypothetical protein | LV84_00208 | Not Available | Negative | 251291 - 251719 | 16591.5 |
| acyl carrier protein | LV84_00209 | Not Available | Positive | 251872 - 252108 | 8520.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | LV84_00210 | Not Available | Positive | 252128 - 253378 | 44599.1 |
| ribonuclease-3 | LV84_00211 | Not Available | Positive | 253387 - 254127 | 27956.9 |
| nad+ synthase (glutamine-hydrolysing) | LV84_00212 | Not Available | Positive | 254160 - 255998 | 69141.8 |
| prolipoprotein diacylglyceryl transferase | LV84_00213 | Not Available | Positive | 256010 - 257113 | 41431.6 |
| hypothetical protein | LV84_00214 | Not Available | Negative | 257110 - 257334 | 8325.43 |
| surface antigen-like variable number repeat protein | LV84_00215 | Not Available | Positive | 257398 - 258858 | 56751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
