Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma 54 modulation/s30ea-like ribosomal protein | LV84_02172 | Not Available | Positive | 2491106 - 2491420 | 11474.4 |
| prc-barrel domain protein | LV84_02173 | Not Available | Positive | 2491678 - 2492445 | 29229.2 |
| do/deqq family serine protease | LV84_02174 | Not Available | Positive | 2492639 - 2494138 | 53042.0 |
| putative surface protein with fasciclin (fas1) repeats | LV84_02175 | Not Available | Positive | 2494662 - 2495192 | 19741.6 |
| hypothetical protein | LV84_02176 | Not Available | Positive | 2495521 - 2495667 | 5324.07 |
| hypothetical protein | LV84_02177 | Not Available | Positive | 2495819 - 2496421 | 22416.6 |
| prc-barrel domain protein | LV84_02178 | Not Available | Positive | 2496464 - 2496988 | 20189.3 |
| mechanosensitive ion channel-like protein | LV84_02179 | Not Available | Positive | 2497283 - 2498215 | 34521.5 |
| hypothetical protein | LV84_02180 | Not Available | Positive | 2498349 - 2498645 | 11001.1 |
| hypothetical protein | LV84_02181 | Not Available | Positive | 2498808 - 2499527 | 27433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
