Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abortive infection abih-like protein | LV84_02152 | Not Available | Positive | 2469547 - 2470665 | 43945.9 |
| hypothetical protein | LV84_02153 | Not Available | Positive | 2470734 - 2471060 | 12293.7 |
| hypothetical protein | LV84_02154 | Not Available | Positive | 2471118 - 2471669 | 21575.6 |
| helix-turn-helix protein | LV84_02155 | Not Available | Positive | 2471666 - 2472148 | 18319.8 |
| hypothetical protein | LV84_02156 | Not Available | Positive | 2472145 - 2472600 | 17128.5 |
| virulence rhum family protein | LV84_02157 | Not Available | Positive | 2473119 - 2473772 | 25479.8 |
| hypothetical protein | LV84_02158 | Not Available | Positive | 2474322 - 2474537 | 8029.68 |
| fic/doc family protein | LV84_02159 | Not Available | Positive | 2474683 - 2476224 | 59689.1 |
| pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) component | LV84_02160 | Not Available | Negative | 2476497 - 2477945 | 52750.3 |
| hypothetical protein | LV84_02161 | Not Available | Positive | 2478019 - 2478282 | 10296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
