Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin pard1/3/4 | LV84_02142 | Not Available | Positive | 2457988 - 2458230 | 9540.3 |
| toxin pare1/3/4 | LV84_02143 | Not Available | Positive | 2458230 - 2458502 | 10638.7 |
| alpa family transcriptional regulator | LV84_02144 | Not Available | Positive | 2458941 - 2459294 | 13483.4 |
| site-specific recombinase xerd | LV84_02145 | Not Available | Positive | 2459305 - 2460435 | 43519.1 |
| alpa family transcriptional regulator | LV84_02146 | Not Available | Positive | 2461019 - 2461378 | 13907.6 |
| hypothetical protein | LV84_02147 | Not Available | Positive | 2461375 - 2462592 | 47694.4 |
| type i restriction enzyme r subunit | LV84_02148 | Not Available | Positive | 2463524 - 2465896 | 90845.3 |
| hypothetical protein | LV84_02149 | Not Available | Positive | 2465910 - 2466302 | 14799.1 |
| type i restriction enzyme m protein | LV84_02150 | Not Available | Positive | 2466314 - 2467753 | 54695.2 |
| type i restriction enzyme s subunit | LV84_02151 | Not Available | Positive | 2467820 - 2469550 | 65710.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
