Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-related protein | LV84_02122 | Not Available | Positive | 2436681 - 2437133 | 17195.9 |
| trna modification gtpase | LV84_02123 | Not Available | Positive | 2437130 - 2438512 | 51120.2 |
| phage integrase family protein | LV84_02124 | Not Available | Positive | 2438672 - 2439814 | 44615.3 |
| hypothetical protein | LV84_02125 | Not Available | Positive | 2439817 - 2440659 | 32934.7 |
| alpa family transcriptional regulator | LV84_02126 | Not Available | Positive | 2440755 - 2441033 | 10993.2 |
| virulence-associated protein e | LV84_02127 | Not Available | Positive | 2441140 - 2442342 | 46666.5 |
| toprim domain-containing protein | LV84_02128 | Not Available | Positive | 2442565 - 2443437 | 32926.8 |
| mobilization protein mobc | LV84_02129 | Not Available | Positive | 2443590 - 2443877 | 10940.4 |
| relaxase/mobilization nuclease-like protein | LV84_02130 | Not Available | Positive | 2443867 - 2445051 | 43833.4 |
| hypothetical protein | LV84_02131 | Not Available | Negative | 2445696 - 2445884 | 7457.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
