Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminyl-trna synthetase | LV84_02112 | Not Available | Positive | 2426581 - 2428632 | 77193.1 |
| hypothetical protein | LV84_02113 | Not Available | Negative | 2428579 - 2428767 | 7481.36 |
| tetratricopeptide repeat protein | LV84_02114 | Not Available | Negative | 2428991 - 2429593 | 22320.1 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | LV84_02115 | Not Available | Negative | 2429604 - 2430419 | 29014.2 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_02116 | Not Available | Positive | 2430441 - 2431562 | 42355.5 |
| dtxr family iron (metal) dependent repressor | LV84_02117 | Not Available | Positive | 2431877 - 2432539 | 24962.0 |
| manganese/zinc/iron transport system substrate-binding protein | LV84_02118 | Not Available | Positive | 2432536 - 2433450 | 33724.6 |
| manganese/zinc/iron transport system atp- binding protein | LV84_02119 | Not Available | Positive | 2433447 - 2434235 | 29105.6 |
| manganese/zinc/iron transport system permease protein | LV84_02120 | Not Available | Positive | 2434235 - 2435527 | 47555.7 |
| manganese/zinc/iron transport system permease protein | LV84_02121 | Not Available | Positive | 2435619 - 2436413 | 28066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
