Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | LV84_02102 | Not Available | Negative | 2415006 - 2415869 | 32800.4 |
| polyribonucleotide nucleotidyltransferase | LV84_02103 | Not Available | Negative | 2415958 - 2418078 | 76958.2 |
| ssu ribosomal protein s15p | LV84_02104 | Not Available | Negative | 2418177 - 2418452 | 10625.0 |
| lipopolysaccharide export system permease protein | LV84_02105 | Not Available | Negative | 2418513 - 2420291 | 67238.7 |
| hypothetical protein | LV84_02106 | Not Available | Negative | 2420363 - 2420758 | 15400.9 |
| Trna-met | Not Available | Not Available | Positive | 2421109 - 2421182 | Not Available |
| glycosyl hydrolase family 63 | LV84_02108 | Not Available | Negative | 2421383 - 2424025 | 102801.0 |
| glucose 1-dehydrogenase | LV84_02109 | Not Available | Negative | 2424037 - 2424855 | 29787.7 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | LV84_02110 | Not Available | Negative | 2424990 - 2426348 | 49595.5 |
| hypothetical protein | LV84_02111 | Not Available | Positive | 2426402 - 2426584 | 7332.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
