Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of protease activity hflc (stomatin/prohibitin superfamily) | LV84_02082 | Not Available | Positive | 2393542 - 2394387 | 30936.6 |
| sodium-dependent dicarboxylate transporter 2/3/5 | LV84_02083 | Not Available | Positive | 2395279 - 2396745 | 53620.4 |
| histidine kinase | LV84_02084 | Not Available | Positive | 2397495 - 2398895 | 53642.5 |
| lyttr family two component transcriptional regulator | LV84_02085 | Not Available | Positive | 2398897 - 2399577 | 25832.4 |
| arac-like dna-binding protein | LV84_02086 | Not Available | Negative | 2399653 - 2400525 | 33294.0 |
| putative membrane-bound dehydrogenase-like protein | LV84_02087 | Not Available | Positive | 2400668 - 2404192 | 130289.0 |
| d-psicose/d-tagatose/l-ribulose 3-epimerase | LV84_02088 | Not Available | Positive | 2404195 - 2405055 | 31766.8 |
| hypothetical protein | LV84_02089 | Not Available | Positive | 2405052 - 2405186 | 5197.09 |
| putative dehydrogenase | LV84_02090 | Not Available | Positive | 2405219 - 2406334 | 41525.4 |
| hypothetical protein | LV84_02091 | Not Available | Negative | 2406377 - 2406514 | 5379.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
