Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_02052 | Not Available | Positive | 2356380 - 2356856 | 18753.9 |
| hypothetical protein | LV84_02053 | Not Available | Positive | 2357057 - 2358208 | 43387.0 |
| ydjc-like protein | LV84_02054 | Not Available | Positive | 2358208 - 2359425 | 46349.3 |
| sugar phosphate isomerase/epimerase | LV84_02055 | Not Available | Positive | 2359540 - 2360391 | 31688.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_02056 | Not Available | Negative | 2360435 - 2361346 | 33229.3 |
| putative endopeptidase | LV84_02057 | Not Available | Positive | 2361692 - 2363716 | 76409.7 |
| hypothetical protein | LV84_02058 | Not Available | Positive | 2363822 - 2364079 | 9965.55 |
| zinc protease | LV84_02059 | Not Available | Positive | 2364219 - 2367062 | 104910.0 |
| hypothetical protein | LV84_02060 | Not Available | Negative | 2367198 - 2367905 | 26544.7 |
| uncharacterized protein duf4332 | LV84_02061 | Not Available | Positive | 2368125 - 2368532 | 14372.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
