Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase | LV84_02001 | Not Available | Negative | 2300439 - 2301449 | 36409.9 |
| Trna-glu | Not Available | Not Available | Positive | 2301640 - 2301711 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2301763 - 2301837 | Not Available |
| putative heme-binding domain-containing protein | LV84_02004 | Not Available | Positive | 2302020 - 2305439 | 125714.0 |
| tonb-dependent receptor-like protein | LV84_02005 | Not Available | Negative | 2305823 - 2308882 | 110716.0 |
| gliding motility-associated protein gldc | LV84_02006 | Not Available | Negative | 2309200 - 2309538 | 12922.1 |
| 3-oxoacid coa-transferase/3-oxoacid coa-transferase subunit b | LV84_02007 | Not Available | Negative | 2309736 - 2310395 | 23285.6 |
| 3-oxoacid coa-transferase/3-oxoacid coa-transferase subunit a | LV84_02008 | Not Available | Negative | 2310456 - 2311151 | 25041.3 |
| riboflavin kinase/fmn adenylyltransferase | LV84_02009 | Not Available | Negative | 2311163 - 2312086 | 34942.0 |
| trna pseudouridine55 synthase | LV84_02010 | Not Available | Negative | 2312073 - 2312753 | 25232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
