Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance efflux pump | LV84_01991 | Not Available | Positive | 2291976 - 2293331 | 50844.9 |
| outer membrane protein tolc | LV84_01992 | Not Available | Positive | 2293328 - 2294716 | 52537.6 |
| uncharacterized protein (duf1330 family) | LV84_01993 | Not Available | Positive | 2294762 - 2295046 | 10724.8 |
| alkyl hydroperoxide reductase subunit ahpc | LV84_01994 | Not Available | Negative | 2295116 - 2295751 | 23480.9 |
| alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein | LV84_01995 | Not Available | Positive | 2295932 - 2296264 | 12298.8 |
| radical sam/cys-rich protein | LV84_01996 | Not Available | Positive | 2296268 - 2297320 | 39242.3 |
| hypothetical protein | LV84_01997 | Not Available | Positive | 2297286 - 2297915 | 23709.2 |
| hypothetical protein | LV84_01998 | Not Available | Positive | 2298028 - 2298651 | 23734.2 |
| rsam/selenodomain-associated transferase 2 | LV84_01999 | Not Available | Positive | 2298644 - 2299372 | 27033.9 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | LV84_02000 | Not Available | Positive | 2299369 - 2300430 | 39482.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
