Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan hydrolase-like protein with peptidoglycan-binding domain | LV84_01981 | Not Available | Positive | 2282830 - 2283657 | 31265.1 |
| uncharacterized protein duf1572 | LV84_01982 | Not Available | Positive | 2283662 - 2284108 | 17290.1 |
| d-3-phosphoglycerate dehydrogenase | LV84_01983 | Not Available | Negative | 2284178 - 2286070 | 70523.7 |
| uncharacterized protein duf4920 | LV84_01984 | Not Available | Positive | 2286295 - 2286813 | 18787.5 |
| hypothetical protein | LV84_01985 | Not Available | Positive | 2286815 - 2287021 | 8010.81 |
| uncharacterized protein (duf983 family) | LV84_01986 | Not Available | Positive | 2287096 - 2287470 | 14000.2 |
| choline-glycine betaine transporter | LV84_01987 | Not Available | Negative | 2287464 - 2289047 | 58947.7 |
| putative membrane protein | LV84_01988 | Not Available | Positive | 2289085 - 2289465 | 14427.4 |
| tetr family transcriptional regulator | LV84_01989 | Not Available | Positive | 2289619 - 2290269 | 24660.6 |
| abc-type bacteriocin/lantibiotic exporter with double-glycine peptidase domain | LV84_01990 | Not Available | Positive | 2290262 - 2291971 | 63788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
