Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske fe-s protein | LV84_01951 | Not Available | Positive | 2248903 - 2249403 | 17298.3 |
| ycei-like domain-containing protein | LV84_01952 | Not Available | Positive | 2249403 - 2249939 | 19939.3 |
| hypothetical protein | LV84_01953 | Not Available | Positive | 2249942 - 2250811 | 32440.8 |
| hypothetical protein | LV84_01954 | Not Available | Negative | 2250956 - 2252539 | 60569.6 |
| putative dna-binding transcriptional regulator yafy | LV84_01955 | Not Available | Positive | 2252672 - 2253586 | 35046.6 |
| nucleotidyltransferase-like protein | LV84_01956 | Not Available | Negative | 2253622 - 2253963 | 13041.3 |
| nucleotidyltransferase substrate binding protein (tigr01987 family) | LV84_01957 | Not Available | Negative | 2253973 - 2254374 | 15963.0 |
| uncharacterized protein duf3784 | LV84_01958 | Not Available | Negative | 2254654 - 2254953 | 10785.5 |
| n-acetylated-alpha-linked acidic dipeptidase | LV84_01959 | Not Available | Negative | 2255139 - 2257244 | 76598.8 |
| sh3 domain-containing protein | LV84_01960 | Not Available | Negative | 2257247 - 2258416 | 43466.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
