Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4091 | LV84_01911 | Not Available | Positive | 2190211 - 2191806 | 61084.2 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01912 | Not Available | Positive | 2191799 - 2192887 | 41694.2 |
| capsule assembly protein wzi | LV84_01913 | Not Available | Positive | 2192893 - 2194578 | 64875.6 |
| udp-n-acetyl-d-galactosamine dehydrogenase | LV84_01914 | Not Available | Positive | 2194791 - 2196122 | 49092.0 |
| polysaccharide export outer membrane protein | LV84_01915 | Not Available | Positive | 2196188 - 2197018 | 30912.4 |
| capsular exopolysaccharide synthesis family protein | LV84_01916 | Not Available | Positive | 2197026 - 2199383 | 89844.2 |
| methionyl-trna formyltransferase | LV84_01917 | Not Available | Positive | 2199411 - 2200604 | 45040.4 |
| lipopolysaccharide transport system permease protein | LV84_01918 | Not Available | Positive | 2200666 - 2201526 | 32887.9 |
| abc-type polysaccharide/polyol phosphate transport system atpase subunit | LV84_01919 | Not Available | Positive | 2201533 - 2202798 | 46671.8 |
| hypothetical protein | LV84_01920 | Not Available | Positive | 2202834 - 2203721 | 33775.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
