Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-2-amino-2-deoxyglucuronate dehydrogenase | LV84_01901 | Not Available | Positive | 2177787 - 2178755 | 36420.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | LV84_01902 | Not Available | Positive | 2178824 - 2179966 | 42885.5 |
| 4-alpha-l-fucosyltransferase (glycosyl transferase family 56) | LV84_01903 | Not Available | Positive | 2179963 - 2181099 | 43762.5 |
| o-antigen/teichoic acid export membrane protein | LV84_01904 | Not Available | Positive | 2181096 - 2182559 | 54742.5 |
| glycosyl transferase family 4 | LV84_01905 | Not Available | Positive | 2182563 - 2183693 | 43040.8 |
| asparagine synthase (glutamine-hydrolysing) | LV84_01906 | Not Available | Positive | 2183701 - 2185578 | 72070.7 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01907 | Not Available | Positive | 2185611 - 2186744 | 43112.0 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01908 | Not Available | Positive | 2186748 - 2188031 | 48702.0 |
| hypothetical protein | LV84_01909 | Not Available | Positive | 2188144 - 2189184 | 40079.6 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01910 | Not Available | Positive | 2189147 - 2190214 | 40556.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
