Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00176 | Not Available | Negative | 220139 - 221026 | 33674.5 |
| membrane protein deda with snare-associated domain | LV84_00177 | Not Available | Negative | 221062 - 221655 | 22552.5 |
| hypothetical protein | LV84_00178 | Not Available | Negative | 222138 - 222431 | 11395.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00179 | Not Available | Negative | 222433 - 222939 | 19776.1 |
| 3',5'-cyclic amp phosphodiesterase cpda | LV84_00180 | Not Available | Negative | 223338 - 224165 | 31307.2 |
| hypothetical protein | LV84_00181 | Not Available | Negative | 224414 - 224788 | 14368.8 |
| hypothetical protein | LV84_00182 | Not Available | Negative | 225141 - 225512 | 13876.0 |
| dna-binding padr family transcriptional regulator | LV84_00183 | Not Available | Negative | 225752 - 226126 | 14293.6 |
| transposase-like zinc ribbon protein | LV84_00184 | Not Available | Negative | 226151 - 227077 | 35944.3 |
| hypothetical protein | LV84_00185 | Not Available | Negative | 227369 - 228157 | 30615.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
