Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-regulated abc transporter atpase subunit sufc | LV84_01881 | Not Available | Negative | 2152355 - 2153119 | 28132.8 |
| iron-regulated abc transporter membrane component sufb | LV84_01882 | Not Available | Negative | 2153169 - 2154614 | 53509.4 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | LV84_01883 | Not Available | Negative | 2154847 - 2155320 | 17902.8 |
| zinc carboxypeptidase | LV84_01884 | Not Available | Positive | 2155725 - 2157644 | 72393.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | LV84_01885 | Not Available | Positive | 2157650 - 2160478 | 106568.0 |
| pkd domain-containing protein | LV84_01886 | Not Available | Negative | 2160542 - 2161240 | 26206.7 |
| thymidylate synthase | LV84_01887 | Not Available | Negative | 2161343 - 2162137 | 30363.5 |
| hypothetical protein | LV84_01888 | Not Available | Positive | 2162273 - 2164528 | 85039.3 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | LV84_01889 | Not Available | Negative | 2164537 - 2165580 | 39874.1 |
| hypothetical protein | LV84_01890 | Not Available | Positive | 2165613 - 2165792 | 6826.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
