Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | LV84_01871 | Not Available | Negative | 2142449 - 2144827 | 91000.7 |
| trmh family rna methyltransferase | LV84_01872 | Not Available | Positive | 2144874 - 2145641 | 28715.5 |
| sodium/bile acid cotransporter 7 | LV84_01873 | Not Available | Positive | 2145638 - 2146627 | 36221.8 |
| acyl-coa-binding protein | LV84_01874 | Not Available | Negative | 2146702 - 2146962 | 9718.41 |
| citrate synthase | LV84_01875 | Not Available | Negative | 2147084 - 2148370 | 47827.0 |
| putative yphp/yqiw family bacilliredoxin | LV84_01876 | Not Available | Negative | 2148612 - 2149034 | 15147.3 |
| fes assembly suf system protein | LV84_01877 | Not Available | Negative | 2149061 - 2149405 | 12775.3 |
| cysteine desulfuration protein sufe | LV84_01878 | Not Available | Negative | 2149410 - 2149841 | 16167.3 |
| cysteine desulfurase/selenocysteine lyase | LV84_01879 | Not Available | Negative | 2149838 - 2151061 | 44946.0 |
| fe-s cluster assembly protein sufd | LV84_01880 | Not Available | Negative | 2151064 - 2152332 | 46422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
