Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_01841 | Not Available | Positive | 2101925 - 2102419 | 19082.8 |
| hypothetical protein | LV84_01842 | Not Available | Positive | 2102437 - 2103015 | 22159.8 |
| uncharacterized protein duf1835 | LV84_01843 | Not Available | Negative | 2103060 - 2103806 | 28193.8 |
| uncharacterized protein duf1801 | LV84_01844 | Not Available | Negative | 2103809 - 2104225 | 15613.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | LV84_01845 | Not Available | Positive | 2104425 - 2106860 | 90456.2 |
| tonb-linked susc/raga family outer membrane protein | LV84_01846 | Not Available | Positive | 2107322 - 2110480 | 115344.0 |
| susd-like starch-binding protein associating with outer membrane | LV84_01847 | Not Available | Positive | 2110492 - 2111985 | 55195.9 |
| glyoxylase i family protein | LV84_01848 | Not Available | Negative | 2112052 - 2112441 | 15121.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | LV84_01849 | Not Available | Negative | 2112452 - 2114557 | 77587.5 |
| putative nuclease of restriction endonuclease-like (recb) superfamily | LV84_01850 | Not Available | Negative | 2114597 - 2115298 | 26948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
