Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | LV84_01831 | Not Available | Positive | 2089725 - 2092139 | 89419.4 |
| uncharacterized protein duf4197 | LV84_01832 | Not Available | Negative | 2092261 - 2092989 | 26656.1 |
| phosphoribosylglycinamide formyltransferase-1 | LV84_01833 | Not Available | Negative | 2093208 - 2093765 | 20303.6 |
| acetyl esterase/lipase | LV84_01834 | Not Available | Positive | 2093996 - 2094835 | 31206.4 |
| hth-type transcriptional regulator/antitoxin higa | LV84_01835 | Not Available | Positive | 2094926 - 2095159 | 8865.99 |
| putative nucleic acid-binding protein | LV84_01836 | Not Available | Negative | 2095178 - 2095597 | 15900.4 |
| hypothetical protein | LV84_01837 | Not Available | Negative | 2095581 - 2095847 | 10366.6 |
| replication restart dna helicase pria | LV84_01838 | Not Available | Negative | 2095970 - 2098489 | 95363.8 |
| hypothetical protein | LV84_01839 | Not Available | Negative | 2098493 - 2100520 | 76153.4 |
| gscfa family protein | LV84_01840 | Not Available | Negative | 2100603 - 2101514 | 35003.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
