Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28-like protein | LV84_01811 | Not Available | Negative | 2061368 - 2062345 | 36685.0 |
| cysteinyl-trna synthetase | LV84_01812 | Not Available | Negative | 2062335 - 2063825 | 56502.2 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | LV84_01813 | Not Available | Negative | 2064156 - 2065682 | 55126.6 |
| chitinase | LV84_01814 | Not Available | Negative | 2065872 - 2067134 | 47508.5 |
| uncharacterized protein (duf305 family) | LV84_01815 | Not Available | Negative | 2067369 - 2067983 | 23114.0 |
| lipocalin-like protein | LV84_01816 | Not Available | Negative | 2068162 - 2068551 | 14534.9 |
| lysm domain-containing protein | LV84_01817 | Not Available | Negative | 2068584 - 2068856 | 10062.2 |
| putative autotransporter adhesin-like protein | LV84_01818 | Not Available | Positive | 2069306 - 2069998 | 23868.1 |
| putative abc transport system permease protein | LV84_01819 | Not Available | Positive | 2070204 - 2072573 | 87685.4 |
| putative autotransporter adhesin-like protein | LV84_01820 | Not Available | Positive | 2072790 - 2073485 | 24316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
