Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | LV84_01801 | Not Available | Negative | 2045482 - 2047602 | 77212.2 |
| l-rhamnose isomerase/sugar isomerase | LV84_01802 | Not Available | Positive | 2048365 - 2049639 | 48131.1 |
| arylsulfatase a-like enzyme | LV84_01803 | Not Available | Positive | 2049668 - 2051137 | 54677.6 |
| gluconolactonase | LV84_01804 | Not Available | Positive | 2051365 - 2052498 | 41611.3 |
| transmembrane family 220 protein | LV84_01805 | Not Available | Positive | 2053432 - 2053797 | 13858.2 |
| nipsnap protein | LV84_01806 | Not Available | Positive | 2053996 - 2054745 | 28654.0 |
| hypothetical protein | LV84_01807 | Not Available | Negative | 2054892 - 2055389 | 18684.7 |
| glucose/arabinose dehydrogenase | LV84_01808 | Not Available | Negative | 2055550 - 2058993 | 125740.0 |
| galactokinase | LV84_01809 | Not Available | Negative | 2059120 - 2060268 | 42247.5 |
| laci family transcriptional regulator | LV84_01810 | Not Available | Negative | 2060258 - 2061295 | 38453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
