Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LV84_01771 | Not Available | Negative | 2004565 - 2007537 | 107714.0 |
| hypothetical protein | LV84_01772 | Not Available | Negative | 2007751 - 2009637 | 71217.1 |
| fumarylacetoacetate hydrolase | LV84_01773 | Not Available | Positive | 2009984 - 2011249 | 46636.6 |
| padr family transcriptional regulator | LV84_01774 | Not Available | Positive | 2011686 - 2012027 | 12548.4 |
| abc-type antimicrobial peptide transport system permease subunit | LV84_01775 | Not Available | Positive | 2012017 - 2014623 | 97834.1 |
| spoiiaa-like protein | LV84_01776 | Not Available | Positive | 2014824 - 2015180 | 13509.6 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_01777 | Not Available | Negative | 2015384 - 2016736 | 50777.8 |
| dna-binding ntrc family response regulator | LV84_01778 | Not Available | Negative | 2016726 - 2018114 | 53165.1 |
| hlyd family secretion protein | LV84_01779 | Not Available | Positive | 2018443 - 2019690 | 46956.6 |
| four helix bundle protein | LV84_01780 | Not Available | Positive | 2019840 - 2020208 | 14267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
