Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer vird4/trag family protein | LV84_01751 | Not Available | Positive | 1978481 - 1980469 | 74979.0 |
| padr family transcriptional regulator | LV84_01752 | Not Available | Positive | 1980774 - 1981109 | 12683.6 |
| macb-like protein | LV84_01753 | Not Available | Positive | 1981120 - 1983735 | 98840.2 |
| hypothetical protein | LV84_01754 | Not Available | Positive | 1983930 - 1984181 | 9829.96 |
| hypothetical protein | LV84_01755 | Not Available | Positive | 1984428 - 1985156 | 27387.6 |
| nucleotidyltransferase abieii toxin of type iv toxin-antitoxin system | LV84_01756 | Not Available | Positive | 1985153 - 1986136 | 37515.0 |
| carboxypeptidase-like protein | LV84_01757 | Not Available | Negative | 1986566 - 1988149 | 60632.1 |
| fic/doc family protein | LV84_01758 | Not Available | Negative | 1988654 - 1989607 | 36631.5 |
| site-specific recombinase xerd | LV84_01759 | Not Available | Negative | 1989715 - 1990929 | 47266.3 |
| Trna-ser | Not Available | Not Available | Positive | 1991291 - 1991382 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
